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vanvalenlab/deepcell-tf

A TensorFlow 2 library for single-cell analysis providing deep learning models for cell segmentation and tracking in biological imaging data.

deepcell-tf
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This library provides pre-existing deep learning models for cell segmentation (nuclear and whole-cell) in 2D and 3D images, as well as cell tracking in time-lapse datasets. Users can apply these models to biological imaging data or develop new custom models using TensorFlow 2 as the underlying framework. It targets multiplexed tissue images and live-cell imaging movies.

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