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instadeepai/nucleotide-transformer

A repository of transformer-based genomic language models developed by InstaDeep for analyzing DNA and RNA sequences.

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This repository hosts the Nucleotide Transformer and related models, which are foundation models trained on genomic data using JAX and the Transformer architecture. It provides pre-trained weights and inference code for extracting insights from biological sequences, with applications spanning genomics and transcriptomics. The models have been trained on large-scale GPU/TPU infrastructure including Cambridge-1 and TPU-v4 accelerators.

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